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PDF to PMID List — Extract PubMed IDs

Extract PubMed IDs from matched biomedical references in a PDF bibliography and download one PMID per line.

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How does it work?

1

Step 1

Upload your PDF bibliography

Drop a PDF that contains a references section. CiteMe extracts the bibliography server-side and discards the file.

2

Step 2

Verify extracted metadata

Each parsed reference is matched against OpenAlex, CrossRef, and Semantic Scholar so titles, authors, years, journals, and DOIs come from canonical records where possible.

3

Step 3

Download a PMID list

CiteMe returns pmid-list.txt with one PubMed ID per line when matched biomedical references expose PMIDs.

By CiteMe Editorial Team·

Which citation styles are supported?

Need it in a specific citation style?

Format the result in the style your paper requires — APA, MLA, Harvard, Vancouver, Chicago, or IEEE.

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Frequently asked questions

What does the PMID list export include?
The PMID list includes one PubMed ID per line when the matched academic record exposes a PMID.
Are the extracted fields verified?
Yes. CiteMe matches parsed references against academic databases such as CrossRef, OpenAlex, and Semantic Scholar before export, so canonical metadata is used when available.
Does this work with scanned PDFs?
Scanned PDFs need OCR first. If no selectable text can be extracted, use the OCR retry flow or run OCR before uploading the bibliography.

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Each result shows its match evidence and metadata source.